Publications

A novel modeling framework to secure efficiency and accuracy in real-time ensemble flood forecasting. Water Resources Research, 2020.

DOI

Embedded model error representation for Bayesian model calibration. International Journal for Uncertainty Quantification, 2019.

DOI

Streamflow, stomata, and soil pits: sources of inference for complex models with fast, robust uncertainty quantification. Advances in Water Resources, 2019.

DOI

Compressive sensing adaptation for polynomial chaos expansions. 2019.

DOI

Uncertainty quantification for incident helium flux in plasma-exposed tungsten. International Journal for Uncertainty Quantification, 2018.

DOI

Compressed sparse tensor based quadrature for vibrational quantum mechanics integrals. Computer Methods in Applied Mechanics and Engineering, 2018.

DOI

Compressive sensing with cross-validation and stop-sampling for sparse polynomial chaos expansions. SIAM/ASA Journal of Uncertainty Quantification, 2018.

DOI

The Pitfalls of Provisioning Exascale Networks: A Trace Replay Analysis for Understanding Communication Performance. High Performance Computing, 2018.

DOI

Exploring the Interplay of Resilience and Energy Consumption for a Task-Based Partial Differential Equations Preconditioner. Parallel Computing, 2018.

DOI

Probabilistic parameter estimation in a 2-step chemical kinetics model for n-dodecane jet autoignition. Combustion Theory and Modeling, 2018.

DOI

Global Sensitivity Analysis and Estimation of Model Error, toward Uncertainty Quantification in Scramjet Computations. AIAA Journal, 2018.

DOI

The Impact of Parametric Uncertainties on Biogeochemistry in the E3SM Land Model. Journal of Advances in Modeling Earth Systems, 2018.

DOI

Multifidelity Statistical Analysis of Large Eddy Simulations in Scramjet Computations. AIAA SciTech Forum, 2018.

DOI

Temporal and spatial variation in peatland carbon cycling and implications for interpreting responses of an ecosystem-scale warming experiment. Soil Science Society of America, 2017.

DOI

Inference of Reaction Rate Parameters based on Summary Statistics from Experiments. Proc. Comb. Inst., 2017.

DOI

A resilient domain decomposition polynomial chaos solver for uncertain elliptic PDEs. Computer Physics Communications, 2017.

DOI

The Uncertainty Quantification Toolkit (UQTk). Handbook of Uncertainty Quantification, 2017.

DOI

Surrogate Models for Uncertainty Propagation and Sensitivity Analysis. Handbook of Uncertainty Quantification, 2017.

DOI

Partial differential equations preconditioner resilient to soft and hard faults. The International Journal of High Performance Computing Applications, 2017.

DOI

Global Sensitivity Analysis and Quantification of Model Error for Large Eddy Simulation in Scramjet Design. 19th AIAA Non-Deterministic Approaches Conference, 2017.

DOI

Discrete A Priori Bounds for the Detection of Corrupted PDE Solutions in Exascale Computations. SIAM Journal on Scientific Computing, 2017.

DOI

Performance scaling variability and energy analysis for a resilient ULFM-based PDE solver. 7th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems (ScalA), 2016.

DOI

Uncertainty Quantification in LES of Channel Flow. International Journal for Numerical Methods in Fluids, 2016.

DOI

Scalability of Partial Differential Equations Preconditioner Resilient to Soft and Hard Faults. Proceedings of High Performance Computing: 31st International Conference, ISC High Performance 2016, Frankfurt, Germany, June 19-23, 2016, 2016.

DOI

ULFM-MPI implementation of a resilient task-based partial differential equations preconditioner. Proceedings of the ACM Workshop on Fault-Tolerance for HPC at Extreme Scale, 2016.

DOI

Partial differential equations preconditioner resilient to soft and hard faults. 2015 IEEE International Conference on Cluster Computing (CLUSTER), 2015.

DOI

Fault Resilient Domain Decomposition Preconditioner for PDEs. SIAM Journal on Scientific Computing, 2015.

DOI

Quantifying Sampling Noise and Parametric Uncertainty in Atomistic-to-Continuum Simulations Using Surrogate Models. Multiscale Modeling & Simulation, 2015.

DOI

Global Sensitivity Analysis, Probabilistic Calibration, and Predictive Assessment for the Data Assimilation Linked Ecosystem Carbon Model. Geosci. Model Dev., 2015.

DOI

Enhancing l1-minimization estimates of polynomial chaos expansions using basis selection. Journal of Computational Physics, 2015.

DOI

Bayesian calibration of the Community Land Model using surrogates. SIAM/ASA Journal on Uncertainty Quantification, 2015.

DOI

Probabilistic Methods for Sensitivity Analysis and Calibration of Computer Models in the NASA Challenge Problem. Journal of Aerospace Information Systems, 2015.

DOI

On the Statistical Calibration of Physical Models. International Journal of Chemical Kinetics, 2015.

DOI

Hybrid discrete/continuum algorithms for stochastic reaction networks. Journal of Computational Physics, 2015.

DOI

Data Free Inference of Uncertain Parameters in Chemical Models. International Journal for Uncertainty Quantification, 2014.

DOI

Uncertainty Quantification Methods for Model Calibration, Validation, and Risk Analysis. AIAA-2014-1497, 16-th AIAA Non-Deterministic Approaches Conference, 2014.

DOI

Dimensionality reduction for complex models via Bayesian compressive sensing. International Journal of Uncertainty Quantification, 2014.

DOI

Validation and uncertainty assessment of extreme-scale HPC simulation through Bayesian inference. European Conference on Parallel Processing, 2013.

DOI

A publication title, such as title of a paper. In ICA, 2013.

PDF

Uncertainty Quantification in MD Simulations. Part II: Inference of force-field parameters. SIAM J. Multiscale Model. Simul, 2012.

DOI

Uncertainty Quantification in MD Simulations. Part I: Stochastic reformulation of the forward problem. SIAM J. Multiscale Model. Simul, 2012.

DOI

Multiparameter Spectral Representation of Noise-Induced Competence in Bacillus subtilis. IEEE/ACM Trans. Comp. Biol. and Bioinf, 2012.

DOI

A Stochastic Multiscale Coupling Scheme to Account for Sampling Noise in Atomistic-to-Continuum Simulations. Multiscale Modeling & Simulation, 2012.

DOI

Uncertainty Quantification given Discontinuous Model Response and a Limited Number of Model Runs. SIAM J. Scientific Computing, 2012.

DOI

Efficient uncertainty quantification methodologies for high-dimensional climate land models. 2011.

DOI

Sources of cell-to-cell variability in canonical nuclear factor-κB (NF-κB) signaling pathway inferred from single cell dynamic images. Journal of Biological Chemistry, 2011.

DOI

Real-time characterization of partially observed epidemics using surrogate models. 2011.

DOI

Spectral Representation and Reduced Order Modeling of the Dynamics of Stochastic Reaction Networks via Adaptive Data Partitioning. SIAM Journal on Scientific Computing, 2010.

DOI

Uncertainty Quantification in the Presence of Limited Climate Model Data with Discontinuities. ICDMW ‘09: Proceedings of the 2009 IEEE International Conference on Data Mining Workshops, 2009.

DOI

Bayesian Inference of Spectral Expansions for Predictability Assessment in Stochastic Reaction Networks. J. Comput. Theor. Nanosci., 2009.

DOI

Asymptotics of rare events in birth death processes bypassing the exact solutions. Journal of Physics Condensed Matter, 2007.

DOI

A numerical method for some stochastic differential equations with multiplicative noise. Physics Letters A, 2005.

DOI

Fluctuations in chemical reactions in a large volume. GFD Program Proceedings, 2005.

PDF